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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11582100 chr1:22455449 A/G 5.31E-7 479 15.33 18.47 6.87 KM Plot
THCA rs11582542 chr1:22455588 T/C 5.31E-7 479 15.33 18.47 6.87 KM Plot
THCA rs11582961 chr1:184023059 A/G 3.33E-16 490 17.77 17.83 15.2 KM Plot
THCA rs11583790 chr1:22390078 G/A 4.11E-8 488 15.32 17.68 9.47 KM Plot
THCA rs11584458 chr1:22448932 C/T 1.87E-8 485 15.67 17.88 9.47 KM Plot
THCA rs11584713 chr1:22462143 G/A 1.25E-9 469 15.67 17.73 12.37 KM Plot
THCA rs11586488 chr1:22348556 C/T 3.07E-5 490 12.4 17.65 14.78 KM Plot
THCA rs115869907 chr6:25365901 C/A 6.22E-15 487 15.17 22.67 16.72 KM Plot
THCA rs11587270 chr1:48736273 T/C 7.71E-5 488 17.83 14.78 14.78 KM Plot
THCA rs115883250 chr1:91724011 A/G 8.46E-6 484 15.77 17.03 17.77 KM Plot
THCA rs11588603 chr1:224368977 A/C 9.78E-5 484 16.63 14.93 12.43 KM Plot
THCA rs115955629 chr19:43596950 G/T 0.000238 485 15.33 18.03 10.08 KM Plot
THCA rs116016873 chr6:24428127 C/G 5.89E-7 482 16.3 14.9 9.25 KM Plot
THCA rs11602266 chr11:57094509 G/A 2.14E-11 489 16.27 14.77 20.77 KM Plot
THCA rs11603691 chr11:57107617 G/A 5.85E-11 482 16.22 15.07 17.78 KM Plot